Cryptic diversity and biogeography of South American salamanders

Tropical regions harbor a majority of Earth’s biodiversity. In most taxonomic groups there is a gradient of increasing diversity from polar to tropical latitudes. In a few groups, however, the gradient is partly inverted and species richness peaks in temperate regions. One of those groups are salama...

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Autor principal: Hervas Sotomayor, Francisca (author)
Formato: masterThesis
Publicado em: 2016
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Acesso em linha:https://repositorio.puce.edu.ec/handle/123456789/21043
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author Hervas Sotomayor, Francisca
author_facet Hervas Sotomayor, Francisca
author_role author
collection Repositorio Pontificia Universidad Católica del Ecuador
dc.contributor.none.fl_str_mv Ron Melo, Santiago Rafael
dc.creator.none.fl_str_mv Hervas Sotomayor, Francisca
dc.date.none.fl_str_mv 2016
25/11/2023 9:00
25/11/2023 9:00
dc.format.none.fl_str_mv application/pdf
dc.identifier.none.fl_str_mv https://repositorio.puce.edu.ec/handle/123456789/21043
dc.language.none.fl_str_mv en
dc.publisher.none.fl_str_mv PUCE - Quito
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.source.none.fl_str_mv reponame:Repositorio Pontificia Universidad Católica del Ecuador
instname:Pontificia Universidad Católica del Ecuador
instacron:PUCE
dc.subject.none.fl_str_mv Salamanders
Amphibians - Urodela
Phylogeny
Phylogenetic analysis
Biodiversity
dc.title.none.fl_str_mv Cryptic diversity and biogeography of South American salamanders
dc.type.none.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/masterThesis
description Tropical regions harbor a majority of Earth’s biodiversity. In most taxonomic groups there is a gradient of increasing diversity from polar to tropical latitudes. In a few groups, however, the gradient is partly inverted and species richness peaks in temperate regions. One of those groups are salamanders, a group with higher diversity in North and Middle America than in tropical South America. This inverse gradient could result from a time for diversification effect because they arrived more recently to South America. However, an additional contributing factor could be that salamander diversity is underestimated in South America. In this study we used mitochondrial and nuclear DNA sequences to obtain a more comprehensive phylogeny of South American salamanders, to estimate their time of colonization of this continent and assess their species diversity. Using published and new genetic data, we generated a time-calibrated phylogeny and reconstructed ancestral bioregions and altitudes to infer the colonization history of Bolitoglossa in South America. The phylogenetic analyses recognized 19 candidate species, of which 13 are confirmed candidate species. This represents an increase of at least 38% in the species content of South American salamanders demonstrating that species richness is severely underestimated. Our results show that the ancestor of Bolitoglossa first colonized middle altitudes of the Andes, between the Oligocene and the Miocene. Therefore, all extant species descend from an Andean ancestor, which subsequently colonized higher and lower elevations. Our results suggest that salamander history has been closely linked to the Andean uplift and agrees with previous studies showing that most of the South American biodiversity diversified prior to the Quaternary. Our results show that the Andes have been a species pump for lowland regions. This highlights the importance of the protection of montane regions to maintain the processes that promote species diversification of this group of organisms. We show that formally described species with wide geographical distributions are in fact species complexes on which each species has small geographic ranges. Therefore, the extinction probability of South American salamanders it is likely to be underestimated under the IUCN’s Red List.
eu_rights_str_mv openAccess
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spelling Cryptic diversity and biogeography of South American salamandersHervas Sotomayor, FranciscaSalamandersAmphibians - UrodelaPhylogenyPhylogenetic analysisBiodiversityTropical regions harbor a majority of Earth’s biodiversity. In most taxonomic groups there is a gradient of increasing diversity from polar to tropical latitudes. In a few groups, however, the gradient is partly inverted and species richness peaks in temperate regions. One of those groups are salamanders, a group with higher diversity in North and Middle America than in tropical South America. This inverse gradient could result from a time for diversification effect because they arrived more recently to South America. However, an additional contributing factor could be that salamander diversity is underestimated in South America. In this study we used mitochondrial and nuclear DNA sequences to obtain a more comprehensive phylogeny of South American salamanders, to estimate their time of colonization of this continent and assess their species diversity. Using published and new genetic data, we generated a time-calibrated phylogeny and reconstructed ancestral bioregions and altitudes to infer the colonization history of Bolitoglossa in South America. The phylogenetic analyses recognized 19 candidate species, of which 13 are confirmed candidate species. This represents an increase of at least 38% in the species content of South American salamanders demonstrating that species richness is severely underestimated. Our results show that the ancestor of Bolitoglossa first colonized middle altitudes of the Andes, between the Oligocene and the Miocene. Therefore, all extant species descend from an Andean ancestor, which subsequently colonized higher and lower elevations. Our results suggest that salamander history has been closely linked to the Andean uplift and agrees with previous studies showing that most of the South American biodiversity diversified prior to the Quaternary. Our results show that the Andes have been a species pump for lowland regions. This highlights the importance of the protection of montane regions to maintain the processes that promote species diversification of this group of organisms. We show that formally described species with wide geographical distributions are in fact species complexes on which each species has small geographic ranges. Therefore, the extinction probability of South American salamanders it is likely to be underestimated under the IUCN’s Red List.PUCE - QuitoRon Melo, Santiago Rafael25/11/2023 9:0025/11/2023 9:002016info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttps://repositorio.puce.edu.ec/handle/123456789/21043eninfo:eu-repo/semantics/openAccessreponame:Repositorio Pontificia Universidad Católica del Ecuadorinstname:Pontificia Universidad Católica del Ecuadorinstacron:PUCE2025-11-12T09:02:49Zoai:repositorio.puce.edu.ec:123456789/21043Institucionalhttp://repositorio.puce.edu.ec/Institución privadahttps://www.puce.edu.ec/http://repositorio.puce.edu.ec/oai.Ecuador...opendoar:21802025-11-12T09:02:49Repositorio Pontificia Universidad Católica del Ecuador - Pontificia Universidad Católica del Ecuadorfalse
spellingShingle Cryptic diversity and biogeography of South American salamanders
Hervas Sotomayor, Francisca
Salamanders
Amphibians - Urodela
Phylogeny
Phylogenetic analysis
Biodiversity
status_str publishedVersion
title Cryptic diversity and biogeography of South American salamanders
title_full Cryptic diversity and biogeography of South American salamanders
title_fullStr Cryptic diversity and biogeography of South American salamanders
title_full_unstemmed Cryptic diversity and biogeography of South American salamanders
title_short Cryptic diversity and biogeography of South American salamanders
title_sort Cryptic diversity and biogeography of South American salamanders
topic Salamanders
Amphibians - Urodela
Phylogeny
Phylogenetic analysis
Biodiversity
url https://repositorio.puce.edu.ec/handle/123456789/21043